I’m running a build with 4000 genomes using
augur 10.1.1, but I’m getting the error below during
snakemake export. I was wondering how do I change the current recursion limit. This issue on github addresses that point, but I’m not sure what is the best way to go about it.
Validating produced JSON Validating schema of 'auspice/ncov_update.json'... FATAL: Maximum recursion depth reached. You can set the env variable AUGUR_RECURSION_LIMIT to adjust this (current limit: 1000)