General


Topic Replies Views Activity
Welcome to discussion.nextstrain.org!

This website is intended to be a community forum for people using Nextstrain. We’re very interested to help public health and academic groups run Nextstrain analyses and share them (publicly or privately). The goal is to…

4 402 September 11, 2020
About the General category

This category is for general discussion about anything and everything Nextstrain. Make a new topic in this category to: Describe how you’re currently using Nextstrain, so everyone can see awesome examples of genomic …

2 89 June 19, 2020
One of the European countries build is dating the root in 1961
1 19 November 28, 2020
Augur_recursion_limit
1 25 November 20, 2020
Make mafft's --nomemsave optional
2 43 November 9, 2020
Pruning leaf --clock-filter-iqd
2 44 November 7, 2020
Strain in Spain from December
0 92 October 26, 2020
Only global build found in ./auspice
4 53 October 23, 2020
Error with augur filter after latest git pull
7 84 October 14, 2020
What is entropy in the https://nextstrain.org/ncov/global link?
1 76 September 30, 2020
What is the algorithm to assign dates to a phylogenetic tree of SARS-CoV-2?
1 78 September 29, 2020
Feedback on some default exclusions for nCoV workflow
1 64 September 25, 2020
Selected Sample - Transmission lines
1 79 September 21, 2020
SARS-CoV-2 Mutation Data
3 478 September 4, 2020
Galaxy Integration
1 73 August 25, 2020
Make reproducible workflows with conda environments and pinned augur versions
0 81 August 25, 2020
Mugration weights
3 104 August 22, 2020
Best practices for reporting workplace outbreaks/super spreading event data
6 114 August 22, 2020
Data privacy when viewing local and public builds
2 94 August 7, 2020
Global subsampling question
3 156 July 24, 2020
Validating COVID-19 Antibodies test positives
1 117 July 22, 2020
GISAID nextfasta QC criteria
6 181 July 22, 2020
Removing data from Phylogeny Tree Options
4 115 July 21, 2020
Rule refine error: ValueError: x and y arrays must have at least 2 entries
5 132 July 6, 2020
Complex multi-nucleotide and indel mutation events
5 148 June 26, 2020