Topic Replies Views Activity
Welcome to discussion.nextstrain.org!
General

This website is intended to be a community forum for people using Nextstrain. We’re very interested to help public health and academic groups run Nextstrain analyses and share them (publicly or privately). The goal is to…

5 256 September 11, 2020
What is entropy in the https://nextstrain.org/ncov/global link?
General
1 3 September 30, 2020
What is the algorithm to assign dates to a phylogenetic tree of SARS-CoV-2?
General
2 7 September 29, 2020
Customize Nextstrain
Help and Getting Started
3 19 September 29, 2020
Error with augur filter after latest git pull
General
4 11 September 28, 2020
Feedback on some default exclusions for nCoV workflow
General
2 24 September 25, 2020
ERROR: All samples have been dropped! Check filter rules and metadata file format
Help and Getting Started
1 15 September 21, 2020
Selected Sample - Transmission lines
General
2 25 September 21, 2020
Request for adding Bangladesh in the nextstrain available builds section
Help and Getting Started
3 44 September 19, 2020
Wyoming Build Request
Help and Getting Started
2 35 September 19, 2020
SARS-CoV-2 Mutation Data
General
4 300 September 4, 2020
Using travel information (country_exposure)
3 38 September 2, 2020
Problem with lat/longs
Help and Getting Started
4 53 August 31, 2020
Galaxy Integration
General
2 39 August 25, 2020
Make reproducible workflows with conda environments and pinned augur versions
General
1 39 August 25, 2020
Mugration weights
General
4 67 August 22, 2020
Best practices for reporting workplace outbreaks/super spreading event data
General
7 74 August 22, 2020
Customizing colors per division/location
2 47 August 15, 2020
Modifying builds.yaml file
Help and Getting Started
2 48 August 15, 2020
Data privacy when viewing local and public builds
General
3 69 August 7, 2020
Running local samples in global background
Help and Getting Started
4 79 August 3, 2020
View bootstrap trees with augur export
Help and Getting Started
4 92 August 1, 2020
Valid Auspice Config Metadata
Help and Getting Started
4 53 July 31, 2020
Using --existing-alignment During Augur Align
Help and Getting Started
8 86 July 29, 2020
Global subsampling question
General
4 119 July 24, 2020
Validating COVID-19 Antibodies test positives
General
2 83 July 22, 2020
GISAID nextfasta QC criteria
General
7 116 July 22, 2020
Removing data from Phylogeny Tree Options
General
5 80 July 21, 2020
Feedback on tutorial
Help and Getting Started
8 167 July 17, 2020
Error message executing new tutorial
Help and Getting Started
12 101 July 16, 2020