Hi, everyone
I’m trying to generate a clade.tsv file to annotate specific clades in my tree.json. I know I can get mutation info by clicking/hovering on the tree as per the documentation, but I’m unsure about the criteria for selecting which mutations are critical.
What standards or thresholds (e.g., mutation frequency, nucleotide vs. amino acid, uniqueness to the clade) should one use to pick the “key” defining mutations to ensure accurate and stable clade labeling?
Thanks