Hello everyone, I’m starting with nextstrain and while running getting started pipeline( documented here ). I’m getting treetime.UnknownMethodError. Here is the complete error augur refine is using TreeTime version 0.8.6 11.08 TreeTime.reroot: with method or node: Wuhan/Hu-1/2019 Traceback (most …

Hi @Sourabh7211 , welcome! This treetime.UnknownMethodError error can occur for a few reasons, most commonly either: The requested root sequence isn’t present in the alignment because it got filtered out (or never added) at some earlier point in the workflow. The requested root sequence is pres…

Error when running getting started pipeline

Help and Getting Started

Sourabh7211 February 14, 2022, 3:02pm 3

Thanks, solution here worked.

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Error when running getting started pipeline

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