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Using a metadata table in the Flu build?
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1
|
145
|
April 4, 2024
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Error with a flu reference sequence for alignment
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8
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281
|
March 27, 2024
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Error: unknown sequence format for Augur tree
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2
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477
|
March 27, 2024
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Error in combining ndjson-files in mpox pipeline
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4
|
154
|
March 21, 2024
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Preparing data from paired-end FASTQ files
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1
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181
|
March 7, 2024
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.meta.genome_annotations failed additionalProperties validation for false
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3
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1218
|
March 7, 2024
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How Shannon entropy calculated per codon?
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5
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871
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February 29, 2024
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Nexststrain RSV FullGenome clades
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4
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280
|
February 14, 2024
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Yamagata fluB HA1 amino acid in the 'Genotype' or 'Color By' selections
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3
|
131
|
February 14, 2024
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How to add years on x-axis using nextclade
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2
|
301
|
February 11, 2024
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How to show years on x-axis using nextclade
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1
|
173
|
February 11, 2024
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{"E": {"end": 26472, "seqid": "data/genemap.gff"…} failed required validation for ["nuc"]
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2
|
133
|
February 3, 2024
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Nextstrain group
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2
|
423
|
August 31, 2021
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Windows 10 won't install Nextclade CLI
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6
|
549
|
January 20, 2024
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Understanding RSV clade assignment
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4
|
309
|
January 12, 2024
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Alignments in Nextstrain
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2
|
280
|
January 12, 2024
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How to combine multiple .json files in a single auspice view?
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9
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257
|
January 2, 2024
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Accession in sequences.fasta, but not in nexstrain website
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2
|
223
|
December 20, 2023
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Does the rate estimate include a 95% confidence interval?
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1
|
352
|
December 19, 2023
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Fixing the clock rate when refining an H3N2 phylogenetic tree?
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1
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317
|
December 19, 2023
|
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ERROR: 300 or more distinct discrete states found
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1
|
262
|
December 19, 2023
|
|
Subsampling Local DENV dataset based on genetic similarity
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1
|
267
|
December 19, 2023
|
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How to viz flu vaccine strain as the nextstrain seasonal flu page
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1
|
322
|
December 19, 2023
|
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Refine without an alignment
|
|
2
|
194
|
December 18, 2023
|
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How to download avian influenza fasta and metadata files from GISAID or GenBank in a compatible format?
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1
|
432
|
December 15, 2023
|
|
Auspice tanglegrams with more than 2 trees?
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|
2
|
205
|
December 1, 2023
|
|
Augur TreeTime error
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|
6
|
387
|
October 12, 2023
|
|
How to use Nextstrain seasonal flu graph as reference tree for Nextclade?
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1
|
508
|
October 5, 2023
|
|
Change substitution model in SARS-CoV-2 workflow?
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|
4
|
413
|
October 5, 2023
|
|
Displaying a Map in Auspice
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|
2
|
401
|
August 22, 2023
|