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Geography: will augur recognize correct region if the correct country is provided?
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1
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46
|
July 13, 2024
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Samples have missing collection date and country info
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2
|
220
|
July 10, 2024
|
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S3 or URL links for workflow data
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6
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156
|
July 3, 2024
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Ingest workflow: NCBI Datasets, Entrez, or something else?
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1
|
146
|
June 28, 2024
|
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Need help installing local instance of Nextclade web
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3
|
180
|
May 21, 2024
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Geo resolution had no demes
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4
|
213
|
May 10, 2024
|
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Having issues installing on macOS
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1
|
198
|
May 10, 2024
|
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Remove map background
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3
|
320
|
May 3, 2024
|
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Question about augur filter
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5
|
381
|
April 23, 2024
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Problem with Influenza H5N1 tanglegram
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2
|
225
|
April 19, 2024
|
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Guide to filtering GISAID data for division-specific SARS-CoV-2 builds
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1
|
1633
|
April 17, 2024
|
|
Using a metadata table in the Flu build?
|
|
1
|
185
|
April 4, 2024
|
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Error with a flu reference sequence for alignment
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|
8
|
408
|
March 27, 2024
|
|
Error: unknown sequence format for Augur tree
|
|
2
|
519
|
March 27, 2024
|
|
Error in combining ndjson-files in mpox pipeline
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4
|
283
|
March 21, 2024
|
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Preparing data from paired-end FASTQ files
|
|
1
|
239
|
March 7, 2024
|
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.meta.genome_annotations failed additionalProperties validation for false
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3
|
1258
|
March 7, 2024
|
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How Shannon entropy calculated per codon?
|
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5
|
1035
|
February 29, 2024
|
|
Nexststrain RSV FullGenome clades
|
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4
|
361
|
February 14, 2024
|
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Yamagata fluB HA1 amino acid in the 'Genotype' or 'Color By' selections
|
|
3
|
179
|
February 14, 2024
|
|
How to add years on x-axis using nextclade
|
|
2
|
352
|
February 11, 2024
|
|
How to show years on x-axis using nextclade
|
|
1
|
209
|
February 11, 2024
|
|
{"E": {"end": 26472, "seqid": "data/genemap.gff"…} failed required validation for ["nuc"]
|
|
2
|
181
|
February 3, 2024
|
|
Nextstrain group
|
|
2
|
461
|
August 31, 2021
|
|
Windows 10 won't install Nextclade CLI
|
|
6
|
643
|
January 20, 2024
|
|
Understanding RSV clade assignment
|
|
4
|
536
|
January 12, 2024
|
|
Alignments in Nextstrain
|
|
2
|
384
|
January 12, 2024
|
|
How to combine multiple .json files in a single auspice view?
|
|
9
|
408
|
January 2, 2024
|
|
Accession in sequences.fasta, but not in nexstrain website
|
|
2
|
266
|
December 20, 2023
|
|
Does the rate estimate include a 95% confidence interval?
|
|
1
|
421
|
December 19, 2023
|