|
Private mutations
|
|
1
|
140
|
April 6, 2022
|
|
Least common ancestor
|
|
3
|
142
|
March 23, 2022
|
|
Quantifying Country Introductions in Nextstrain
|
|
2
|
166
|
March 4, 2022
|
|
Perform analysis merging my dataset and South America dataset, without subsampling
|
|
3
|
312
|
February 24, 2022
|
|
Spike protein sequences filtered for lineage
|
|
1
|
163
|
February 10, 2022
|
|
21L (Nextclade) assigned to 21M by Augur
|
|
1
|
139
|
February 2, 2022
|
|
Build nextstrain to own server
|
|
1
|
141
|
January 28, 2022
|
|
Quick note on configuring tip colouring in auspice
|
|
0
|
159
|
January 6, 2022
|
|
Sharing build profile
|
|
2
|
204
|
January 4, 2022
|
|
What is logistic gowth and fequency
|
|
0
|
158
|
December 30, 2021
|
|
Augur filter data
|
|
1
|
216
|
December 20, 2021
|
|
Augur frequencies error: RuntimeError: `nodes` value in results/_tip_frequencies.json is not a dictionary. Please check the formatting of this JSON!
|
|
7
|
450
|
December 16, 2021
|
|
Nextclade CLI clade calls different from Nextclade Web calls
|
|
3
|
211
|
December 10, 2021
|
|
Correspondance of SARS-CoV-2 annotations (Nextclade - Pangolin)
|
|
2
|
234
|
December 8, 2021
|
|
Author or lab information for a build
|
|
0
|
142
|
November 19, 2021
|
|
How to parse node data JSONs from the ncov workflow (or any Nextstrain workflow)
|
|
0
|
206
|
November 15, 2021
|
|
H7 hemmaglutinin phylogeny showing FCS
|
|
4
|
277
|
November 13, 2021
|
|
Error in "main_workflow.smk" file
|
|
9
|
647
|
October 29, 2021
|
|
Nextstrain Builds for Other Organisms
|
|
1
|
151
|
October 28, 2021
|
|
Pangolin AY.* designations
|
|
0
|
282
|
October 8, 2021
|
|
Circles on the map
|
|
8
|
411
|
September 30, 2021
|
|
Color clade of phylogenetic tree
|
|
1
|
196
|
September 22, 2021
|
|
Wildcard in subsampling scheme
|
|
3
|
228
|
September 22, 2021
|
|
Masking of position 21987 in SARS-CoV-2 builds
|
|
1
|
264
|
September 16, 2021
|
|
Emerging lineages
|
|
6
|
532
|
September 2, 2021
|
|
Latitude and longitude file
|
|
1
|
238
|
September 7, 2021
|
|
Ncov git pull update
|
|
2
|
212
|
September 5, 2021
|
|
Filtering multiple tips on Auspice at once using queries as CSV
|
|
3
|
316
|
August 26, 2021
|
|
10 science questions on the SARS-COV-2 data
|
|
0
|
248
|
August 12, 2021
|
|
Regarding Extracting Nucleotide Mutations
|
|
7
|
365
|
June 25, 2021
|