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Author or lab information for a build
|
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0
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107
|
November 19, 2021
|
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How to parse node data JSONs from the ncov workflow (or any Nextstrain workflow)
|
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0
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132
|
November 15, 2021
|
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H7 hemmaglutinin phylogeny showing FCS
|
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4
|
237
|
November 13, 2021
|
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Error in "main_workflow.smk" file
|
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9
|
514
|
October 29, 2021
|
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Nextstrain Builds for Other Organisms
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1
|
116
|
October 28, 2021
|
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Pangolin AY.* designations
|
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0
|
241
|
October 8, 2021
|
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How to deal with samples with way too many mutations
|
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1
|
156
|
October 1, 2021
|
|
Circles on the map
|
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8
|
352
|
September 30, 2021
|
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Color clade of phylogenetic tree
|
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1
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149
|
September 22, 2021
|
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Wildcard in subsampling scheme
|
|
3
|
147
|
September 22, 2021
|
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Masking of position 21987 in SARS-CoV-2 builds
|
|
1
|
224
|
September 16, 2021
|
|
Emerging lineages
|
|
6
|
460
|
September 2, 2021
|
|
Latitude and longitude file
|
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1
|
206
|
September 7, 2021
|
|
Ncov git pull update
|
|
2
|
183
|
September 5, 2021
|
|
Filtering multiple tips on Auspice at once using queries as CSV
|
|
3
|
263
|
August 26, 2021
|
|
10 science questions on the SARS-COV-2 data
|
|
0
|
211
|
August 12, 2021
|
|
Regarding Extracting Nucleotide Mutations
|
|
7
|
312
|
June 25, 2021
|
|
SARS-CoV-2 conserved genomic segments
|
|
0
|
191
|
June 1, 2021
|
|
Why nextstrain does not have a bootstrap option in the tree building step?
|
|
0
|
247
|
May 27, 2021
|
|
SARS-CoV-2 Mutation Data
|
|
4
|
1232
|
May 25, 2021
|
|
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xa0 in position 466: invalid start byte
|
|
3
|
872
|
May 11, 2021
|
|
Setting up context sequence set
|
|
1
|
214
|
May 10, 2021
|
|
Using logistic_growth to identify a more transmissible/fit lineage?
|
|
4
|
396
|
April 28, 2021
|
|
How to download variant data?
|
|
1
|
215
|
April 27, 2021
|
|
How to use the Nextstrain Group feature to share results
|
|
1
|
227
|
April 8, 2021
|
|
Narratives Link Setup
|
|
2
|
248
|
March 24, 2021
|
|
Extract nt and AA mutation info per branch from JSON after augur ancestral/translate/export
|
|
6
|
349
|
March 22, 2021
|
|
Avoiding large memory requirements by switching to `nextalign`
|
|
0
|
467
|
March 22, 2021
|
|
Auspice view: metadata, drop reference strains, combine multiple trees
|
|
3
|
249
|
March 20, 2021
|
|
Nextstrain community hosting with git-lfs?
|
|
2
|
227
|
March 16, 2021
|