|
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xa0 in position 466: invalid start byte
|
|
3
|
616
|
May 11, 2021
|
|
Setting up context sequence set
|
|
1
|
140
|
May 10, 2021
|
|
Using logistic_growth to identify a more transmissible/fit lineage?
|
|
4
|
324
|
April 28, 2021
|
|
How to download variant data?
|
|
1
|
165
|
April 27, 2021
|
|
How to use the Nextstrain Group feature to share results
|
|
1
|
169
|
April 8, 2021
|
|
Narratives Link Setup
|
|
2
|
191
|
March 24, 2021
|
|
Extract nt and AA mutation info per branch from JSON after augur ancestral/translate/export
|
|
6
|
283
|
March 22, 2021
|
|
Avoiding large memory requirements by switching to `nextalign`
|
|
0
|
365
|
March 22, 2021
|
|
Auspice view: metadata, drop reference strains, combine multiple trees
|
|
3
|
203
|
March 20, 2021
|
|
Nextstrain community hosting with git-lfs?
|
|
2
|
147
|
March 16, 2021
|
|
How to evaluate confidence of migration events?
|
|
2
|
181
|
March 15, 2021
|
|
An "AttributeError: 'NoneType' object has no attribute 'shape'" when building phylogenetic tree using Augur
|
|
6
|
839
|
March 9, 2021
|
|
Perform analysis merging my dataset and South America dataset, without subsampling
|
|
2
|
156
|
March 8, 2021
|
|
Auspice doesn't install correctly
|
|
5
|
801
|
March 8, 2021
|
|
Correcting for sampling bias
|
|
0
|
146
|
February 28, 2021
|
|
Trouble identifying mutations in clade definitions (20J/501Y.V3)
|
|
2
|
274
|
February 28, 2021
|
|
Augur translate - gaps
|
|
1
|
147
|
February 23, 2021
|
|
Nextstrain build of 346 Sarbecoviruses partial rdrp
|
|
0
|
121
|
February 8, 2021
|
|
Map NextStrain names to others?
|
|
2
|
654
|
February 5, 2021
|
|
Pruning leaf --clock-filter-iqd
|
|
4
|
470
|
January 23, 2021
|
|
Rule align & deletions in coding regions
|
|
3
|
198
|
January 23, 2021
|
|
How can a community build be added to the SARS-CoV-2 portal?
|
|
1
|
160
|
January 11, 2021
|
|
Separate subsampling procedure
|
|
0
|
140
|
January 5, 2021
|
|
Extracting geo-location from lab annotation
|
|
5
|
259
|
December 30, 2020
|
|
Show Transmission Lines for Location-Level Geographical Resolution
|
|
0
|
181
|
December 30, 2020
|
|
Make reproducible workflows with conda environments and pinned augur versions
|
|
0
|
496
|
August 25, 2020
|
|
GISAID nextfasta QC criteria
|
|
7
|
680
|
December 15, 2020
|
|
What is entropy in the https://nextstrain.org/ncov/global link?
|
|
3
|
752
|
December 10, 2020
|
|
Accumulated cost in using nextstrain
|
|
0
|
185
|
December 6, 2020
|
|
One of the European countries build is dating the root in 1961
|
|
1
|
255
|
November 28, 2020
|
