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CLI link broken from clades.nextstrain.org
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3
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280
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January 24, 2024
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Displaying trees from NCBI Pathogen Browser in auspice.us
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9
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603
|
January 18, 2024
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Analysing only Spike gene sequences from SARS-CoV-2
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1
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343
|
December 19, 2023
|
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Augur traits values null
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2
|
314
|
November 16, 2023
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Repeated runs of the same data will give different results
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6
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528
|
September 4, 2023
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How to export trees viewed in auspice as images?
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9
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662
|
September 1, 2023
|
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Pandas error during augur filter: 'NoneType' object has no attribute 'str'
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8
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954
|
August 16, 2023
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The Dataset column to display on the Auspice
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9
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644
|
July 17, 2023
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Refine: Midpoint rooting without timetree?
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2
|
403
|
July 16, 2023
|
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Runtimewarning: invalid value encountered in cast
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3
|
5717
|
June 19, 2023
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How to use evofr
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3
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409
|
June 13, 2023
|
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Snakemake throwing IncompleteFilesException when using --forceall?
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4
|
668
|
June 13, 2023
|
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Is it possible to build a new Docker image with a Dockerfile
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7
|
736
|
May 26, 2023
|
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Problems automating build with a Snakefile
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2
|
517
|
May 13, 2023
|
|
GISAID download augur input
|
|
1
|
775
|
April 28, 2023
|
|
SARS-CoV-2 lineage data download
|
|
1
|
399
|
April 18, 2023
|
|
Source documents defining all the influenza clades
|
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0
|
370
|
January 21, 2023
|
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Augur refine for mpox which has varying evolutionary rate
|
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0
|
310
|
January 20, 2023
|
|
Advanced Gene Viewing Options
|
|
1
|
367
|
January 19, 2023
|
|
Conda environment error
|
|
6
|
572
|
December 19, 2022
|
|
How to find my result by auspice
|
|
8
|
768
|
September 22, 2022
|
|
Can quality control other poxvirus genomes？
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|
1
|
367
|
September 20, 2022
|
|
Monkeypox: Divergence units in number of mutations
|
|
1
|
442
|
September 12, 2022
|
|
Subsample different datasets
|
|
2
|
454
|
September 1, 2022
|
|
Determining mutation frequency?
|
|
4
|
832
|
August 9, 2022
|
|
How to change the X-axis units for Divergence
|
|
1
|
528
|
August 1, 2022
|
|
GISAID database
|
|
7
|
597
|
July 29, 2022
|
|
Draw a pseudo-phylogeny tree using know transmission chain
|
|
0
|
359
|
July 14, 2022
|
|
ImportError: cannot import name 'InterProcessReaderWriterLock' from 'fasteners'
|
|
0
|
346
|
July 6, 2022
|
|
Nextstrain Installation (epiweek)
|
|
2
|
483
|
June 30, 2022
|