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Problems for the SARS-CoV-2 Workflow
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2
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319
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April 22, 2024
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Question about mafft alignment using a reference sequence
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0
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22
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April 17, 2024
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Inferring pathogen.json from a nextclade.tsv results
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0
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27
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April 16, 2024
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When Nextclade CLI calls clades but Nextclade Web does not
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0
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26
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April 16, 2024
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IQTREE error: Some sequences (see above) are problematic, please check your alignment again
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3
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55
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April 11, 2024
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How can I know the Nextclade_pango for each of SC2 sequences?
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0
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157
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April 10, 2024
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Can't open this page!
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1
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76
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March 12, 2024
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List of clade-like attributes for each organism
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2
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83
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March 9, 2024
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Unable to view zika tutorial
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8
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137
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January 25, 2024
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CLI link broken from clades.nextstrain.org
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3
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142
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January 24, 2024
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Displaying trees from NCBI Pathogen Browser in auspice.us
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9
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417
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January 18, 2024
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Analysing only Spike gene sequences from SARS-CoV-2
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1
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202
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December 19, 2023
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Augur traits values null
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2
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195
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November 16, 2023
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Repeated runs of the same data will give different results
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6
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414
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September 4, 2023
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How to export trees viewed in auspice as images?
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9
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376
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September 1, 2023
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Pandas error during augur filter: 'NoneType' object has no attribute 'str'
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8
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446
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August 16, 2023
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The Dataset column to display on the Auspice
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9
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460
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July 17, 2023
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Refine: Midpoint rooting without timetree?
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2
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287
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July 16, 2023
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Runtimewarning: invalid value encountered in cast
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3
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2717
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June 19, 2023
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How to use evofr
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3
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309
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June 13, 2023
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Snakemake throwing IncompleteFilesException when using --forceall?
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4
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420
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June 13, 2023
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Is it possible to build a new Docker image with a Dockerfile
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7
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528
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May 26, 2023
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Problems automating build with a Snakefile
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2
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362
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May 13, 2023
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GISAID download augur input
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1
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523
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April 28, 2023
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SARS-CoV-2 lineage data download
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1
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310
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April 18, 2023
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Source documents defining all the influenza clades
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0
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255
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January 21, 2023
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Augur refine for mpox which has varying evolutionary rate
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0
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234
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January 20, 2023
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Advanced Gene Viewing Options
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1
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269
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January 19, 2023
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Conda environment error
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6
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378
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December 19, 2022
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How to find my result by auspice
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8
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591
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September 22, 2022
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