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Quantifying Country Introductions in Nextstrain
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2
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493
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March 4, 2022
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Perform analysis merging my dataset and South America dataset, without subsampling
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3
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613
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February 24, 2022
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Spike protein sequences filtered for lineage
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1
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609
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February 10, 2022
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21L (Nextclade) assigned to 21M by Augur
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1
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333
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February 2, 2022
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Build nextstrain to own server
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1
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410
|
January 28, 2022
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Quick note on configuring tip colouring in auspice
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0
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426
|
January 6, 2022
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Sharing build profile
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2
|
462
|
January 4, 2022
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What is logistic gowth and fequency
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0
|
383
|
December 30, 2021
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Augur filter data
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1
|
463
|
December 20, 2021
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Augur frequencies error: RuntimeError: `nodes` value in results/_tip_frequencies.json is not a dictionary. Please check the formatting of this JSON!
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7
|
858
|
December 16, 2021
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Nextclade CLI clade calls different from Nextclade Web calls
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3
|
597
|
December 10, 2021
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Correspondance of SARS-CoV-2 annotations (Nextclade - Pangolin)
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2
|
881
|
December 8, 2021
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Author or lab information for a build
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0
|
322
|
November 19, 2021
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How to parse node data JSONs from the ncov workflow (or any Nextstrain workflow)
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0
|
425
|
November 15, 2021
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H7 hemmaglutinin phylogeny showing FCS
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4
|
507
|
November 13, 2021
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Error in "main_workflow.smk" file
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9
|
1316
|
October 29, 2021
|
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Nextstrain Builds for Other Organisms
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|
1
|
319
|
October 28, 2021
|
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Pangolin AY.* designations
|
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0
|
489
|
October 8, 2021
|
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Circles on the map
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8
|
845
|
September 30, 2021
|
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Color clade of phylogenetic tree
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1
|
529
|
September 22, 2021
|
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Wildcard in subsampling scheme
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3
|
507
|
September 22, 2021
|
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Masking of position 21987 in SARS-CoV-2 builds
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|
1
|
464
|
September 16, 2021
|
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Emerging lineages
|
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6
|
1113
|
September 2, 2021
|
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Latitude and longitude file
|
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1
|
464
|
September 7, 2021
|
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Ncov git pull update
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2
|
398
|
September 5, 2021
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Filtering multiple tips on Auspice at once using queries as CSV
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|
3
|
585
|
August 26, 2021
|
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10 science questions on the SARS-COV-2 data
|
|
0
|
436
|
August 12, 2021
|
|
Regarding Extracting Nucleotide Mutations
|
|
7
|
624
|
June 25, 2021
|
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SARS-CoV-2 conserved genomic segments
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0
|
398
|
June 1, 2021
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Why nextstrain does not have a bootstrap option in the tree building step?
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0
|
604
|
May 27, 2021
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