|
An "AttributeError: 'NoneType' object has no attribute 'shape'" when building phylogenetic tree using Augur
|
|
6
|
2070
|
March 9, 2021
|
|
Auspice doesn't install correctly
|
|
5
|
2093
|
March 8, 2021
|
|
Correcting for sampling bias
|
|
0
|
410
|
February 28, 2021
|
|
Trouble identifying mutations in clade definitions (20J/501Y.V3)
|
|
2
|
508
|
February 28, 2021
|
|
Augur translate - gaps
|
|
1
|
375
|
February 23, 2021
|
|
Nextstrain build of 346 Sarbecoviruses partial rdrp
|
|
0
|
327
|
February 8, 2021
|
|
Map NextStrain names to others?
|
|
2
|
1058
|
February 5, 2021
|
|
Pruning leaf --clock-filter-iqd
|
|
4
|
1246
|
January 23, 2021
|
|
Rule align & deletions in coding regions
|
|
3
|
472
|
January 23, 2021
|
|
How can a community build be added to the SARS-CoV-2 portal?
|
|
1
|
399
|
January 11, 2021
|
|
Separate subsampling procedure
|
|
0
|
404
|
January 5, 2021
|
|
Extracting geo-location from lab annotation
|
|
5
|
662
|
December 30, 2020
|
|
Show Transmission Lines for Location-Level Geographical Resolution
|
|
0
|
438
|
December 30, 2020
|
|
Make reproducible workflows with conda environments and pinned augur versions
|
|
0
|
1297
|
August 25, 2020
|
|
GISAID nextfasta QC criteria
|
|
7
|
1021
|
December 15, 2020
|
|
What is entropy in the https://nextstrain.org/ncov/global link?
|
|
3
|
1605
|
December 10, 2020
|
|
Accumulated cost in using nextstrain
|
|
0
|
428
|
December 6, 2020
|
|
One of the European countries build is dating the root in 1961
|
|
1
|
476
|
November 28, 2020
|
|
Augur_recursion_limit
|
|
1
|
1149
|
November 20, 2020
|
|
Make mafft's --nomemsave optional
|
|
2
|
640
|
November 9, 2020
|
|
Strain in Spain from December
|
|
0
|
536
|
October 26, 2020
|
|
Only global build found in ./auspice
|
|
4
|
568
|
October 23, 2020
|
|
Error with augur filter after latest git pull
|
|
7
|
1028
|
October 14, 2020
|
|
What is the algorithm to assign dates to a phylogenetic tree of SARS-CoV-2?
|
|
1
|
657
|
September 29, 2020
|
|
Feedback on some default exclusions for nCoV workflow
|
|
1
|
463
|
September 25, 2020
|
|
Selected Sample - Transmission lines
|
|
1
|
613
|
September 21, 2020
|
|
Galaxy Integration
|
|
1
|
409
|
August 25, 2020
|
|
Mugration weights
|
|
3
|
545
|
August 22, 2020
|
|
Best practices for reporting workplace outbreaks/super spreading event data
|
|
6
|
568
|
August 22, 2020
|
|
Data privacy when viewing local and public builds
|
|
2
|
443
|
August 7, 2020
|