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AuspiceV2 with num_date... for samples only?
|
|
1
|
70
|
April 27, 2021
|
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How to download variant data?
|
|
1
|
91
|
April 27, 2021
|
|
KeyError in main_workflow.smk
|
|
2
|
75
|
April 27, 2021
|
|
Max-date (and min-date) -related problem
|
|
2
|
65
|
April 26, 2021
|
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How Shannon entropy calculated per codon?
|
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4
|
107
|
April 26, 2021
|
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Error in Job 3: Exporting data files for for auspice
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|
1
|
71
|
April 25, 2021
|
|
Make gap in Genomes
|
|
1
|
66
|
April 25, 2021
|
|
Change Logo in Auspice
|
|
2
|
83
|
April 23, 2021
|
|
Missing input files for rule all
|
|
4
|
220
|
April 21, 2021
|
|
Identify a SARS-CoV2 strain
|
|
2
|
156
|
April 14, 2021
|
|
Frequency plot smoothing
|
|
3
|
102
|
April 14, 2021
|
|
How to add an annotation in entropy?
|
|
2
|
93
|
April 13, 2021
|
|
Augur Refine fails but does not generate an error log
|
|
4
|
89
|
April 12, 2021
|
|
Large memory requirements
|
|
6
|
251
|
April 10, 2021
|
|
How to use the Nextstrain Group feature to share results
|
|
1
|
82
|
April 8, 2021
|
|
Unsure why data is filtering out
|
|
7
|
188
|
April 8, 2021
|
|
Tree building snakemake rule failed, but iqtree successfully built?
|
|
0
|
92
|
April 5, 2021
|
|
Error in augur,
|
|
1
|
96
|
April 5, 2021
|
|
Error in rule tree
|
|
22
|
261
|
April 5, 2021
|
|
Opening results.json file from nextclade CLI
|
|
0
|
77
|
March 31, 2021
|
|
Intervals in frequency panels
|
|
3
|
92
|
March 31, 2021
|
|
Obtain auspice phylogenetic tree in journal format
|
|
2
|
78
|
March 31, 2021
|
|
Artifactual genomes/nodes
|
|
4
|
89
|
March 29, 2021
|
|
Narratives Link Setup
|
|
2
|
83
|
March 24, 2021
|
|
All samples dropped during augur filter
|
|
18
|
206
|
March 23, 2021
|
|
Help with error in jobid: 7
|
|
1
|
153
|
March 23, 2021
|
|
Extract nt and AA mutation info per branch from JSON after augur ancestral/translate/export
|
|
6
|
141
|
March 22, 2021
|
|
Augur alignment failing - problem with mafft
|
|
6
|
443
|
March 22, 2021
|
|
Avoiding large memory requirements by switching to `nextalign`
|
|
0
|
194
|
March 22, 2021
|
|
Draw and color subtree using NEXUS ancestral data
|
|
4
|
106
|
March 21, 2021
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