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Use the pre-built phylogenetic trees for further analysis
|
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0
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49
|
July 8, 2025
|
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H1N1 pdm09 tree - EPI ISL identifiers
|
|
1
|
48
|
June 26, 2025
|
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Strain ID and the tab-delimited metadata in Prepare the Sequences
|
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4
|
74
|
June 23, 2025
|
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Need new reference sequences for SARS-CoV2?
|
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1
|
61
|
June 15, 2025
|
|
RSV-A Reference Sequence Question
|
|
2
|
58
|
June 13, 2025
|
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Sequecing data for Africa-Nigeria-Bayelsa
|
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0
|
32
|
June 11, 2025
|
|
How to use criteria to use data from database (Genbank & GISAID)
|
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0
|
47
|
June 11, 2025
|
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Data displayed on nexstrain.org vs downloadable data
|
|
2
|
52
|
June 5, 2025
|
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How can one identify host-adaptive/associated mutations from a tree?
|
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0
|
40
|
May 25, 2025
|
|
Mapbox display issue (api changing without building auspice)
|
|
3
|
65
|
May 12, 2025
|
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Output all amino acids per CDS using Nextclade
|
|
2
|
56
|
May 7, 2025
|
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Downloading mpox fasta files
|
|
1
|
34
|
April 17, 2025
|
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How do I install additional packages in the nextstrain conda environment?
|
|
2
|
65
|
April 17, 2025
|
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Customizing Colors in Nextstrain SARS-CoV-2 Temporal Phylogenetic Tree for Enhanced Analysis
|
|
5
|
110
|
March 31, 2025
|
|
SARS-CoV-2 new lineage BA.3.2 still not in nightly.json
|
|
2
|
178
|
March 29, 2025
|
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Are there any other groups working on Orthonairovirus haemorrhagiae typing
|
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0
|
37
|
March 27, 2025
|
|
Tree visualization issue with num_date
|
|
1
|
47
|
March 24, 2025
|
|
Serving Asupice with NGINX
|
|
6
|
108
|
March 24, 2025
|
|
File traitsdivision.mugration_model
|
|
4
|
596
|
March 21, 2025
|
|
Using influenza datasets in clades.nextstrain.org
|
|
7
|
157
|
March 20, 2025
|
|
How to map SARS-COV-2 Clades to WHO name?
|
|
1
|
36
|
March 15, 2025
|
|
Using marginal likelihood with augur
|
|
0
|
38
|
March 12, 2025
|
|
Phylogeny analysis of RSV A and B
|
|
0
|
76
|
February 18, 2025
|
|
Using marginal for augur traits
|
|
0
|
50
|
February 14, 2025
|
|
Build with newest nextstrain/ncov has API requests to mapbox 403:Forbidden
|
|
15
|
3596
|
February 13, 2025
|
|
Trouble with SARS_CoV_2
|
|
38
|
329
|
February 10, 2025
|
|
Where can I look up clade defining mutations for seasonal flu?
|
|
1
|
503
|
February 4, 2025
|
|
Annotation error for aa translation
|
|
2
|
52
|
February 3, 2025
|
|
Is it possible to display the "Second Tree" dropdown menu in a Nextstrain group?
|
|
2
|
44
|
January 30, 2025
|
|
New clade/lineage/sublineage criteria for mpox
|
|
3
|
108
|
January 15, 2025
|