|
Using marginal for augur traits
|
|
0
|
56
|
February 14, 2025
|
|
Build with newest nextstrain/ncov has API requests to mapbox 403:Forbidden
|
|
15
|
3628
|
February 13, 2025
|
|
Trouble with SARS_CoV_2
|
|
38
|
413
|
February 10, 2025
|
|
Where can I look up clade defining mutations for seasonal flu?
|
|
1
|
511
|
February 4, 2025
|
|
Annotation error for aa translation
|
|
2
|
57
|
February 3, 2025
|
|
Is it possible to display the "Second Tree" dropdown menu in a Nextstrain group?
|
|
2
|
48
|
January 30, 2025
|
|
New clade/lineage/sublineage criteria for mpox
|
|
3
|
123
|
January 15, 2025
|
|
Nextclade CLI error - Alignment matrix size exceeds maximum value
|
|
2
|
92
|
January 14, 2025
|
|
Nextclade H5N1 Concatenated view B3.13 and D1.1 genotypes
|
|
3
|
324
|
January 10, 2025
|
|
Aligned nucleotide sequence does not match the CDS translation
|
|
1
|
68
|
January 9, 2025
|
|
Displaying a Map in Auspice
|
|
5
|
537
|
January 5, 2025
|
|
New version rule align error
|
|
2
|
67
|
December 29, 2024
|
|
I want to make a phylogenetic tree using augur and auspice pipeline that analyzes the transmission of SARS-CoV-2 from the global context into the Philippines
|
|
0
|
35
|
December 28, 2024
|
|
Timing of nightly build
|
|
2
|
68
|
December 24, 2024
|
|
Frequency map problem
|
|
2
|
51
|
December 20, 2024
|
|
IDs of early delta-like strains
|
|
0
|
46
|
November 25, 2024
|
|
Problems with coordinate binding
|
|
2
|
60
|
November 23, 2024
|
|
Nextstrain files/datasets in Google Cloud (GCP)?
|
|
3
|
53
|
November 22, 2024
|
|
Load json fails when change dataset on nextstrain
|
|
1
|
31
|
November 20, 2024
|
|
`nextclade sort` Using a serverless local dataset for sorting
|
|
2
|
79
|
November 20, 2024
|
|
Error: Alignment must have at least 3 sequences
|
|
9
|
1115
|
November 7, 2024
|
|
Iqtree error: Tree taxa and alignment sequence do not match
|
|
10
|
420
|
November 6, 2024
|
|
Web App and Nextclade (Pango)
|
|
1
|
102
|
November 1, 2024
|
|
Fix_tree.py error for mpox trees
|
|
3
|
96
|
October 28, 2024
|
|
RSV-A lineage reference sequences have discordant clade assignments
|
|
3
|
110
|
October 27, 2024
|
|
Nextstrain Installation
|
|
8
|
166
|
October 22, 2024
|
|
Question about frequency values in builds files
|
|
3
|
64
|
October 15, 2024
|
|
How to type RSV clades
|
|
3
|
120
|
October 9, 2024
|
|
Nextclade set of possible lineages or distance metric
|
|
2
|
80
|
October 6, 2024
|
|
Next Strain Q/A
|
|
0
|
67
|
July 31, 2024
|